STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRDMT1tRNA aspartic acid methyltransferase 1. (400 aa)    
Predicted Functional Partners:
MAT2A
Methionine adenosyltransferase 2A.
    
 0.904
MAT1A
Methionine adenosyltransferase 1A.
    
 0.904
COQ3
Coenzyme Q3, methyltransferase.
    
 0.843
AMD1
Adenosylmethionine decarboxylase 1.
     
 0.842
DNMT1
DNA methyltransferase 1.
     
 0.814
NTHL1
Nth like DNA glycosylase 1.
  
 
  0.811
AHCY
Adenosylhomocysteinase.
    
 0.773
AHCYL2
Adenosylhomocysteinase like 2.
    
 0.773
AHCYL1
Adenosylhomocysteinase like 1.
    
 0.773
MAPRE2
Microtubule associated protein RP/EB family member 2.
     
 0.737
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.