STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOC1Amine oxidase copper containing 1. (753 aa)    
Predicted Functional Partners:
RPS17
Ribosomal protein S17.
    
 0.877
NUDT12
Nudix hydrolase 12.
     
 0.829
TAT
Tyrosine aminotransferase.
     
 0.741
ENSSHBP00005002483
annotation not available
     
 0.741
AGMAT
Agmatinase.
    
 0.737
ALDH2
Aldehyde dehydrogenase 2 family member.
  
 0.736
ALDH9A1
Aldehyde dehydrogenase 9 family member A1.
  
 0.726
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 0.724
ALDH3A2
Aldehyde dehydrogenase 3 family member A2.
  
 0.724
LOC115604123
Amine oxidase [flavin-containing] B-like.
  
 
 0.722
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.