STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PES1Pescadillo ribosomal biogenesis factor 1. (586 aa)    
Predicted Functional Partners:
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
 0.999
CEBPZ
CCAAT enhancer binding protein zeta.
   
 0.999
DDX18
DEAD-box helicase 18.
   
 0.999
WDR12
WD repeat domain 12.
   
 0.999
RSL1D1
Ribosomal L1 domain containing 1.
   
 0.999
BRIX1
Biogenesis of ribosomes BRX1.
   
 0.999
DDX27
DEAD-box helicase 27.
   
 0.999
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 0.999
MAK16
MAK16 homolog.
   
  0.999
RRP1B
Ribosomal RNA processing 1B.
   
 0.999
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.