STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCK1Phosphoenolpyruvate carboxykinase 1. (622 aa)    
Predicted Functional Partners:
PC
Pyruvate carboxylase.
  
 
 0.906
CS
Citrate synthase.
    
 0.903
SDHA
Succinate dehydrogenase complex flavoprotein subunit A.
   
 
 0.886
BCKDHA
Branched chain keto acid dehydrogenase E1 subunit alpha.
     
 0.882
MDH1
Malate dehydrogenase 1.
  
 
 0.866
PDHB
Pyruvate dehydrogenase E1 beta subunit.
     
 0.864
SUCLG1
succinate-CoA ligase alpha subunit.
    
 0.861
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
     
 0.860
ACLY
ATP citrate lyase.
  
 
 0.853
ENO4
Enolase 4.
     
 0.852
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.