STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSHBP00005008846annotation not available (427 aa)    
Predicted Functional Partners:
ENSSHBP00005002997
annotation not available
   
 0.743
UBB
Ubiquitin B.
    
 0.688
RPS27A
Ribosomal protein S27a.
    
  0.673
DDX41
DEAD-box helicase 41.
    
 0.632
DDX58
DExD/H-box helicase 58.
   
 0.616
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.596
UBE2L5
Ubiquitin conjugating enzyme E2 L3.
    
 0.592
RO60
Ro60, Y RNA binding protein.
    
 0.592
CTLA4
Cytotoxic T-lymphocyte associated protein 4.
    
 0.553
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.551
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.