STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM1Small G protein signaling modulator 1. (1115 aa)    
Predicted Functional Partners:
RAB9A
RAB9A, member RAS oncogene family.
    
 
 0.665
RAB9B
RAB9B, member RAS oncogene family.
    
 
 0.665
ENSSHBP00005019118
annotation not available
    
 
 0.654
RABGEF1
RAB guanine nucleotide exchange factor 1.
     
 0.637
RAB7B
RAB7B, member RAS oncogene family.
    
 
 0.495
ICA1
Islet cell autoantigen 1.
   
 
 0.454
ANKRD27
Ankyrin repeat domain 27.
     
 0.445
RUNDC1
RUN domain containing 1.
    
 
 0.422
CETN1
Centrin 1.
    
   0.412
LOC115604796
Caltractin.
    
   0.412
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.