STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDS5APDS5 cohesin associated factor A. (1356 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes 3.
   
 0.989
RAD21
RAD21 cohesin complex component.
   
 0.988
WAPL
WAPL cohesin release factor.
   
 0.985
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.957
SMC1A
Structural maintenance of chromosomes 1A.
   
 0.957
ESCO1
Establishment of sister chromatid cohesion N-acetyltransferase 1.
    
 0.937
NIPBL
NIPBL cohesin loading factor.
   
 0.931
ENSSHBP00005011071
annotation not available
   
 0.931
PDS5B
PDS5 cohesin associated factor B.
  
0.921
ENSSHBP00005001946
annotation not available
   
 0.918
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.