STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD2Polycystin 2, transient receptor potential cation channel. (957 aa)    
Predicted Functional Partners:
PKD1
Polycystin 1, transient receptor potential channel interacting.
    
0.998
ENSSHBP00005001016
annotation not available
    
0.969
PKDREJ
Polycystin family receptor for egg jelly.
    
0.873
EXOC5
Exocyst complex component 5.
     
 0.737
TRPC1
Transient receptor potential cation channel subfamily C member 1.
    
 
 0.722
CCDC25
Coiled-coil domain containing 25.
    
 0.684
EXOC3L1
Exocyst complex component 3 like 1.
    
 0.654
EXOC3
Exocyst complex component 3.
    
 0.654
RAB3IP
RAB3A interacting protein.
     
 0.634
EXOC4
Exocyst complex component 4.
     
 0.631
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.