STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D13TBC1 domain family member 13. (366 aa)    
Predicted Functional Partners:
RAB35
RAB35, member RAS oncogene family.
     
 0.794
IFT27
Intraflagellar transport 27.
     
 0.696
NCKIPSD
NCK interacting protein with SH3 domain.
   
    0.655
TBC1D10A
TBC1 domain family member 10A.
      
 0.570
SPOUT1
SPOUT domain containing methyltransferase 1.
      
 0.554
EVI5
Ecotropic viral integration site 5.
     
 0.545
TBC1D19
TBC1 domain family member 19.
      
 0.545
TBC1D7
TBC1 domain family member 7-like.
      
 0.533
TBC1D15
TBC1 domain family member 15.
   
  
0.493
TBC1D23
TBC1 domain family member 23.
      
 0.459
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.