STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR83OSWD repeat domain 83 opposite strand. (213 aa)    
Predicted Functional Partners:
CCDC47
Coiled-coil domain containing 47.
    
 0.984
PSMG1
Proteasome assembly chaperone 1.
   
 
  0.925
STUB1
STIP1 homology and U-box containing protein 1.
   
 
  0.922
RUVBL1
RuvB like AAA ATPase 1.
   
 
  0.918
DAD1
Defender against cell death 1.
   
  
 0.797
SDF2
Stromal cell derived factor 2.
   
 
  0.770
SDF2L1
Stromal cell derived factor 2 like 1.
   
 
  0.770
TMCO1
Transmembrane and coiled-coil domains 1.
   
   0.744
MRPS18C
Mitochondrial ribosomal protein S18C.
   
 
  0.734
MRPS18A
Mitochondrial ribosomal protein S18A.
   
 
  0.732
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.