STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA13Spermatogenesis associated 13. (1273 aa)    
Predicted Functional Partners:
APC
APC regulator of WNT signaling pathway.
   
 0.929
APC2
APC regulator of WNT signaling pathway 2.
   
 0.929
RAC2
Rac family small GTPase 2.
    
 0.915
RAC1
Rac family small GTPase 1.
    
 0.903
RAC3
Rac family small GTPase 3.
    
 0.903
CDC42
Cell division cycle 42.
    
 0.891
ENSSHBP00005010176
annotation not available
    
 
0.857
GNB5
G protein subunit beta 5.
    
 0.804
GNB3
G protein subunit beta 3.
    
 0.804
GNB4
G protein subunit beta 4.
    
 0.804
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.