STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D16TBC1 domain family member 16. (788 aa)    
Predicted Functional Partners:
RAB4A
RAB4A, member RAS oncogene family.
    
 0.711
RAB4B
RAB4B, member RAS oncogene family.
    
 0.711
ENSSHBP00005003919
annotation not available
      
 0.594
ENSSHBP00005003952
annotation not available
      
 0.594
TBC1D20
TBC1 domain family member 20.
      
 0.564
DGKE
Diacylglycerol kinase epsilon.
      
 0.557
TBC1D23
TBC1 domain family member 23.
      
 0.545
PPM1L
Protein phosphatase, Mg2+/Mn2+ dependent 1L.
      
 0.527
RAB2A
RAB2A, member RAS oncogene family.
    
 0.512
DNAJC27
DnaJ heat shock protein family (Hsp40) member C27.
    
  0.471
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.