STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWSR1EWS RNA binding protein 1. (663 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.934
TARDBP
TAR DNA binding protein.
   
 0.890
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.864
YBX1
Y-box binding protein 1.
    
 0.840
LOC115619134
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.814
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.814
DHX9
DExH-box helicase 9.
   
 
 0.793
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.781
HNRNPC
Heterogeneous nuclear ribonucleoprotein C.
   
 0.770
SRSF2
Serine and arginine rich splicing factor 2.
   
 0.761
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.