STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSMA4Proteasome 20S subunit alpha 4. (261 aa)    
Predicted Functional Partners:
PSMB2
Proteasome 20S subunit beta 2.
   
 0.999
PSMC1
Proteasome 26S subunit, ATPase 1.
   
 0.999
PSMA6
Proteasome 20S subunit alpha 6.
   
0.999
PSMC6
Proteasome 26S subunit, ATPase 6.
  
 0.999
PSMA3
Proteasome 20S subunit alpha 3.
  
0.999
PSMB3
Proteasome 20S subunit beta 3.
   
 0.999
PSMA2
Proteasome 20S subunit alpha 2.
   
0.999
PSMB6
Proteasome 20S subunit beta 6.
   
 0.999
PSMD11
Proteasome 26S subunit, non-ATPase 11.
   
 0.999
PSMB7
Proteasome 20S subunit beta 7.
   
 0.999
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.