STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE2SDE2 telomere maintenance homolog. (455 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
    
 0.987
PRPF19
pre-mRNA processing factor 19.
    
 0.987
CWC15
CWC15 spliceosome associated protein homolog.
    
 0.984
CDC40
Cell division cycle 40.
    
 0.983
BUD31
BUD31 homolog.
    
  0.983
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
  0.981
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
  0.981
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
  0.980
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.976
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
  0.974
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.