STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG46986.1Ammonium transporter. (387 aa)    
Predicted Functional Partners:
OJG46985.1
Hypothetical protein.
 
 0.999
OJG46781.1
Hypothetical protein.
 
  
 0.911
rsmI
16S rRNA (-2-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.759
OJG46988.1
DNA replication initiation control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family.
       0.720
OJG46989.1
Stage 0 sporulation family protein.
       0.706
OJG46990.1
DNA polymerase III, delta subunit.
       0.642
OJG46991.1
Hypothetical protein.
       0.625
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.577
OJG43982.1
Glutamine synthetase.
  
  
 0.522
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
     
 0.467
Your Current Organism:
Enterococcus hermanniensis
NCBI taxonomy Id: 249189
Other names: CCUG 48100, DSM 17122, E. hermanniensis, Enterococcus hermanniensis Koort et al. 2004, LMG 12317, LMG:12317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.