Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG41984.1 | OJG43270.1 | RV04_GL001143 | RV04_GL000715 | Dihydrolipoamide S-succinyltransferase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.980 |
OJG41984.1 | OJG44022.1 | RV04_GL001143 | RV04_GL000620 | Dihydrolipoamide S-succinyltransferase. | acetyl-CoA C-acetyltransferase. | 0.672 |
OJG41984.1 | OJG44023.1 | RV04_GL001143 | RV04_GL000621 | Dihydrolipoamide S-succinyltransferase. | hydroxymethylglutaryl-CoA synthase. | 0.890 |
OJG41984.1 | OJG45645.1 | RV04_GL001143 | RV04_GL001934 | Dihydrolipoamide S-succinyltransferase. | Mevalonate kinase. | 0.437 |
OJG41984.1 | OJG45647.1 | RV04_GL001143 | RV04_GL001936 | Dihydrolipoamide S-succinyltransferase. | Phosphomevalonate kinase. | 0.437 |
OJG41984.1 | acpP | RV04_GL001143 | RV04_GL001987 | Dihydrolipoamide S-succinyltransferase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.524 |
OJG41984.1 | acpP-2 | RV04_GL001143 | RV04_GL002410 | Dihydrolipoamide S-succinyltransferase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.524 |
OJG41984.1 | dltC | RV04_GL001143 | RV04_GL000211 | Dihydrolipoamide S-succinyltransferase. | D-alanine-poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.524 |
OJG43270.1 | OJG41984.1 | RV04_GL000715 | RV04_GL001143 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Dihydrolipoamide S-succinyltransferase. | 0.980 |
OJG43270.1 | OJG44022.1 | RV04_GL000715 | RV04_GL000620 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | acetyl-CoA C-acetyltransferase. | 0.980 |
OJG43270.1 | OJG44023.1 | RV04_GL000715 | RV04_GL000621 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | hydroxymethylglutaryl-CoA synthase. | 0.941 |
OJG43270.1 | acpP | RV04_GL000715 | RV04_GL001987 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.985 |
OJG43270.1 | acpP-2 | RV04_GL000715 | RV04_GL002410 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.985 |
OJG43270.1 | dltC | RV04_GL000715 | RV04_GL000211 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | D-alanine-poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.985 |
OJG43270.1 | fni | RV04_GL000715 | RV04_GL001937 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.950 |
OJG44022.1 | OJG41984.1 | RV04_GL000620 | RV04_GL001143 | acetyl-CoA C-acetyltransferase. | Dihydrolipoamide S-succinyltransferase. | 0.672 |
OJG44022.1 | OJG43270.1 | RV04_GL000620 | RV04_GL000715 | acetyl-CoA C-acetyltransferase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.980 |
OJG44022.1 | OJG44023.1 | RV04_GL000620 | RV04_GL000621 | acetyl-CoA C-acetyltransferase. | hydroxymethylglutaryl-CoA synthase. | 0.999 |
OJG44022.1 | OJG45645.1 | RV04_GL000620 | RV04_GL001934 | acetyl-CoA C-acetyltransferase. | Mevalonate kinase. | 0.982 |
OJG44022.1 | OJG45646.1 | RV04_GL000620 | RV04_GL001935 | acetyl-CoA C-acetyltransferase. | Diphosphomevalonate decarboxylase. | 0.868 |
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