STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG46562.1Integral inner membrane protein. (343 aa)    
Predicted Functional Partners:
pheT
phenylalanine-tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.687
OJG46847.1
NifU family SUF system FeS assembly protein.
   
    0.655
OJG45202.1
Pentapeptide repeat protein.
       0.617
OJG46471.1
Hypothetical protein.
  
     0.578
OJG45955.1
Hypothetical protein.
  
     0.549
OJG46477.1
Hypothetical protein.
  
     0.544
OJG43265.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
   
    0.521
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.449
OJG42435.1
Hypothetical protein.
  
     0.421
OJG46561.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
       0.402
Your Current Organism:
Enterococcus hermanniensis
NCBI taxonomy Id: 249189
Other names: CCUG 48100, DSM 17122, E. hermanniensis, Enterococcus hermanniensis Koort et al. 2004, LMG 12317, LMG:12317
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