STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG41800.1HAD family hydrolase. (634 aa)    
Predicted Functional Partners:
OJG41799.1
Metal-binding protein.
 
 
 0.971
OJG46978.1
Heavy metal translocating P-type ATPase.
 
 
0.821
OJG46976.1
Copper ion binding protein.
  
 
 0.800
OJG41796.1
Transcriptional regulator, Crp, Fnr family.
 
     0.766
OJG41801.1
Hypothetical protein.
       0.636
OJG41795.1
DNA-binding protein; Belongs to the Dps family.
 
  
 0.586
OJG43270.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.486
OJG41802.1
Site-specific recombinase.
 
    0.478
Your Current Organism:
Enterococcus hermanniensis
NCBI taxonomy Id: 249189
Other names: CCUG 48100, DSM 17122, E. hermanniensis, Enterococcus hermanniensis Koort et al. 2004, LMG 12317, LMG:12317
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