Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG45484.1 | OJG45963.1 | RV04_GL002200 | RV04_GL001729 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Hypothetical protein. | 0.513 |
OJG45484.1 | trmB | RV04_GL002200 | RV04_GL001727 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.781 |
OJG45484.1 | truB | RV04_GL002200 | RV04_GL001138 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.881 |
OJG45957.1 | OJG45958.1 | RV04_GL001723 | RV04_GL001724 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.957 |
OJG45957.1 | OJG45959.1 | RV04_GL001723 | RV04_GL001725 | ABC transporter ATP-binding protein. | D-amino-acid transaminase. | 0.855 |
OJG45957.1 | OJG45960.1 | RV04_GL001723 | RV04_GL001726 | ABC transporter ATP-binding protein. | Phosphotransferase. | 0.786 |
OJG45957.1 | OJG45962.1 | RV04_GL001723 | RV04_GL001728 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.458 |
OJG45957.1 | OJG45963.1 | RV04_GL001723 | RV04_GL001729 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.488 |
OJG45957.1 | trmB | RV04_GL001723 | RV04_GL001727 | ABC transporter ATP-binding protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.740 |
OJG45958.1 | OJG45957.1 | RV04_GL001724 | RV04_GL001723 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.957 |
OJG45958.1 | OJG45959.1 | RV04_GL001724 | RV04_GL001725 | Hypothetical protein. | D-amino-acid transaminase. | 0.858 |
OJG45958.1 | OJG45960.1 | RV04_GL001724 | RV04_GL001726 | Hypothetical protein. | Phosphotransferase. | 0.813 |
OJG45958.1 | OJG45963.1 | RV04_GL001724 | RV04_GL001729 | Hypothetical protein. | Hypothetical protein. | 0.467 |
OJG45958.1 | OJG45964.1 | RV04_GL001724 | RV04_GL001730 | Hypothetical protein. | Type II secretion system protein G. | 0.440 |
OJG45958.1 | trmB | RV04_GL001724 | RV04_GL001727 | Hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.742 |
OJG45959.1 | OJG45957.1 | RV04_GL001725 | RV04_GL001723 | D-amino-acid transaminase. | ABC transporter ATP-binding protein. | 0.855 |
OJG45959.1 | OJG45958.1 | RV04_GL001725 | RV04_GL001724 | D-amino-acid transaminase. | Hypothetical protein. | 0.858 |
OJG45959.1 | OJG45960.1 | RV04_GL001725 | RV04_GL001726 | D-amino-acid transaminase. | Phosphotransferase. | 0.791 |
OJG45959.1 | trmB | RV04_GL001725 | RV04_GL001727 | D-amino-acid transaminase. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.678 |
OJG45960.1 | OJG45957.1 | RV04_GL001726 | RV04_GL001723 | Phosphotransferase. | ABC transporter ATP-binding protein. | 0.786 |
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