Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG43270.1 | OJG43661.1 | RV04_GL000715 | RV04_GL000657 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.993 |
OJG43270.1 | OJG45374.1 | RV04_GL000715 | RV04_GL002090 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, N-acetylglucosamine-specific IIBC component. | 0.704 |
OJG43270.1 | OJG45528.1 | RV04_GL000715 | RV04_GL001817 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | General stress protein. | 0.915 |
OJG43270.1 | OJG45529.1 | RV04_GL000715 | RV04_GL001818 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.455 |
OJG43270.1 | OJG45881.1 | RV04_GL000715 | RV04_GL001647 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, trehalose-specific IIBC component. | 0.704 |
OJG43270.1 | OJG46034.1 | RV04_GL000715 | RV04_GL001800 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, glucose subfamily, IIA component. | 0.704 |
OJG43270.1 | OJG46041.1 | RV04_GL000715 | RV04_GL001807 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, IIBC component. | 0.704 |
OJG43270.1 | OJG47121.1 | RV04_GL000715 | RV04_GL000368 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, beta-glucoside-specific IIABC component. | 0.704 |
OJG43661.1 | OJG43270.1 | RV04_GL000657 | RV04_GL000715 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.993 |
OJG43661.1 | OJG45374.1 | RV04_GL000657 | RV04_GL002090 | Pyruvate kinase; Belongs to the pyruvate kinase family. | PTS system, N-acetylglucosamine-specific IIBC component. | 0.790 |
OJG43661.1 | OJG45528.1 | RV04_GL000657 | RV04_GL001817 | Pyruvate kinase; Belongs to the pyruvate kinase family. | General stress protein. | 0.755 |
OJG43661.1 | OJG45881.1 | RV04_GL000657 | RV04_GL001647 | Pyruvate kinase; Belongs to the pyruvate kinase family. | PTS system, trehalose-specific IIBC component. | 0.790 |
OJG43661.1 | OJG46034.1 | RV04_GL000657 | RV04_GL001800 | Pyruvate kinase; Belongs to the pyruvate kinase family. | PTS system, glucose subfamily, IIA component. | 0.790 |
OJG43661.1 | OJG46041.1 | RV04_GL000657 | RV04_GL001807 | Pyruvate kinase; Belongs to the pyruvate kinase family. | PTS system, IIBC component. | 0.790 |
OJG43661.1 | OJG47121.1 | RV04_GL000657 | RV04_GL000368 | Pyruvate kinase; Belongs to the pyruvate kinase family. | PTS system, beta-glucoside-specific IIABC component. | 0.790 |
OJG45078.1 | OJG45528.1 | RV04_GL002392 | RV04_GL001817 | Hypothetical protein; Belongs to the UPF0374 family. | General stress protein. | 0.549 |
OJG45374.1 | OJG43270.1 | RV04_GL002090 | RV04_GL000715 | PTS system, N-acetylglucosamine-specific IIBC component. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.704 |
OJG45374.1 | OJG43661.1 | RV04_GL002090 | RV04_GL000657 | PTS system, N-acetylglucosamine-specific IIBC component. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.790 |
OJG45374.1 | OJG45528.1 | RV04_GL002090 | RV04_GL001817 | PTS system, N-acetylglucosamine-specific IIBC component. | General stress protein. | 0.830 |
OJG45374.1 | OJG45881.1 | RV04_GL002090 | RV04_GL001647 | PTS system, N-acetylglucosamine-specific IIBC component. | PTS system, trehalose-specific IIBC component. | 0.999 |
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