Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG44010.1 | OJG44890.1 | RV04_GL000608 | RV04_GL000458 | Exodeoxyribonuclease III. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.972 |
OJG44010.1 | OJG45306.1 | RV04_GL000608 | RV04_GL002354 | Exodeoxyribonuclease III. | Hypothetical protein. | 0.896 |
OJG44010.1 | OJG46990.1 | RV04_GL000608 | RV04_GL000237 | Exodeoxyribonuclease III. | DNA polymerase III, delta subunit. | 0.860 |
OJG44010.1 | polA | RV04_GL000608 | RV04_GL002506 | Exodeoxyribonuclease III. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.983 |
OJG44890.1 | OJG44010.1 | RV04_GL000458 | RV04_GL000608 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease III. | 0.972 |
OJG44890.1 | OJG45306.1 | RV04_GL000458 | RV04_GL002354 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.998 |
OJG44890.1 | OJG46644.1 | RV04_GL000458 | RV04_GL001072 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RecQ family ATP-dependent DNA helicase. | 0.847 |
OJG44890.1 | OJG46990.1 | RV04_GL000458 | RV04_GL000237 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III, delta subunit. | 0.998 |
OJG44890.1 | polA | RV04_GL000458 | RV04_GL002506 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.999 |
OJG45304.1 | OJG45305.1 | RV04_GL002352 | RV04_GL002353 | Hypothetical protein; Belongs to the proline racemase family. | Hypothetical protein. | 0.912 |
OJG45304.1 | OJG45306.1 | RV04_GL002352 | RV04_GL002354 | Hypothetical protein; Belongs to the proline racemase family. | Hypothetical protein. | 0.939 |
OJG45304.1 | OJG45307.1 | RV04_GL002352 | RV04_GL002355 | Hypothetical protein; Belongs to the proline racemase family. | D-proline reductase subunit gamma. | 0.701 |
OJG45304.1 | OJG45308.1 | RV04_GL002352 | RV04_GL002356 | Hypothetical protein; Belongs to the proline racemase family. | glycine/betaine/sarcosine/D-proline reductase family selenoprotein B. | 0.959 |
OJG45304.1 | OJG45309.1 | RV04_GL002352 | RV04_GL002357 | Hypothetical protein; Belongs to the proline racemase family. | Hypothetical protein. | 0.706 |
OJG45305.1 | OJG45304.1 | RV04_GL002353 | RV04_GL002352 | Hypothetical protein. | Hypothetical protein; Belongs to the proline racemase family. | 0.912 |
OJG45305.1 | OJG45306.1 | RV04_GL002353 | RV04_GL002354 | Hypothetical protein. | Hypothetical protein. | 0.996 |
OJG45305.1 | OJG45307.1 | RV04_GL002353 | RV04_GL002355 | Hypothetical protein. | D-proline reductase subunit gamma. | 0.918 |
OJG45305.1 | OJG45308.1 | RV04_GL002353 | RV04_GL002356 | Hypothetical protein. | glycine/betaine/sarcosine/D-proline reductase family selenoprotein B. | 0.966 |
OJG45305.1 | OJG45309.1 | RV04_GL002353 | RV04_GL002357 | Hypothetical protein. | Hypothetical protein. | 0.888 |
OJG45306.1 | OJG44010.1 | RV04_GL002354 | RV04_GL000608 | Hypothetical protein. | Exodeoxyribonuclease III. | 0.896 |
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