Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG45092.1 | OJG45093.1 | RV04_GL002406 | RV04_GL002407 | Hypothetical protein. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.531 |
OJG45092.1 | OJG45094.1 | RV04_GL002406 | RV04_GL002408 | Hypothetical protein. | MarR family transcriptional regulator. | 0.671 |
OJG45092.1 | fabH | RV04_GL002406 | RV04_GL002409 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.578 |
OJG45093.1 | OJG45092.1 | RV04_GL002407 | RV04_GL002406 | Cyclopropane-fatty-acyl-phospholipid synthase. | Hypothetical protein. | 0.531 |
OJG45093.1 | OJG45094.1 | RV04_GL002407 | RV04_GL002408 | Cyclopropane-fatty-acyl-phospholipid synthase. | MarR family transcriptional regulator. | 0.497 |
OJG45093.1 | OJG45115.1 | RV04_GL002407 | RV04_GL002429 | Cyclopropane-fatty-acyl-phospholipid synthase. | Methyltransferase. | 0.573 |
OJG45093.1 | OJG45621.1 | RV04_GL002407 | RV04_GL001910 | Cyclopropane-fatty-acyl-phospholipid synthase. | 8-amino-7-oxononanoate synthase. | 0.514 |
OJG45093.1 | OJG46080.1 | RV04_GL002407 | RV04_GL001246 | Cyclopropane-fatty-acyl-phospholipid synthase. | FAD dependent oxidoreductase. | 0.510 |
OJG45093.1 | OJG46755.1 | RV04_GL002407 | RV04_GL000002 | Cyclopropane-fatty-acyl-phospholipid synthase. | Hypothetical protein. | 0.753 |
OJG45093.1 | acpP-2 | RV04_GL002407 | RV04_GL002410 | Cyclopropane-fatty-acyl-phospholipid synthase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.481 |
OJG45093.1 | fabH | RV04_GL002407 | RV04_GL002409 | Cyclopropane-fatty-acyl-phospholipid synthase. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.524 |
OJG45093.1 | glyA | RV04_GL002407 | RV04_GL000108 | Cyclopropane-fatty-acyl-phospholipid synthase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.514 |
OJG45093.1 | guaA | RV04_GL002407 | RV04_GL002133 | Cyclopropane-fatty-acyl-phospholipid synthase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.691 |
OJG45094.1 | OJG45092.1 | RV04_GL002408 | RV04_GL002406 | MarR family transcriptional regulator. | Hypothetical protein. | 0.671 |
OJG45094.1 | OJG45093.1 | RV04_GL002408 | RV04_GL002407 | MarR family transcriptional regulator. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.497 |
OJG45094.1 | acpP-2 | RV04_GL002408 | RV04_GL002410 | MarR family transcriptional regulator. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.841 |
OJG45094.1 | fabH | RV04_GL002408 | RV04_GL002409 | MarR family transcriptional regulator. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.898 |
OJG45115.1 | OJG45093.1 | RV04_GL002429 | RV04_GL002407 | Methyltransferase. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.573 |
OJG45115.1 | OJG45621.1 | RV04_GL002429 | RV04_GL001910 | Methyltransferase. | 8-amino-7-oxononanoate synthase. | 0.488 |
OJG45115.1 | OJG46080.1 | RV04_GL002429 | RV04_GL001246 | Methyltransferase. | FAD dependent oxidoreductase. | 0.518 |
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