STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN57849.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
SHN57854.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
     0.994
SHN64205.1
Cu2+-exporting ATPase.
  
  0.829
SHN65579.1
Copper chaperone CopZ.
  
  0.779
SHN65421.1
Heavy-metal-associated domain-containing protein.
   
  0.777
SHN64101.1
Protein of unknown function.
   
  0.777
SHN64122.1
Copper chaperone CopZ.
   
  0.777
SHN57858.1
Sugar phosphate permease.
       0.759
SHN57845.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
    0.566
SHN64236.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
 
 0.560
SHN57863.1
Beta-glucosidase.
       0.433
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.