STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN61368.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
SHN58977.1
Hypothetical protein.
  
     0.760
SHN74250.1
Hypothetical protein.
  
     0.708
SHN50342.1
Mevalonate kinase.
  
     0.676
SHN65672.1
Protein involved in gliding motility GldN.
  
     0.671
SHN70129.1
Hypothetical protein.
  
     0.646
SHN79394.1
Protein of unknown function.
  
     0.638
SHN59013.1
Uncharacterised ACR, YkgG family COG1556.
  
     0.612
SHN78094.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
     0.600
SHN54093.1
Hypothetical protein.
 
     0.586
rpmH
LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.
       0.585
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.