STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN66135.1N-acylneuraminate cytidylyltransferase. (232 aa)    
Predicted Functional Partners:
SHN66118.1
N-acetylneuraminate synthase.
 
 
 0.995
SHN66126.1
UDP-N-acetylglucosamine 2-epimerase/UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing,TIGR03568.
 
 
 0.975
SHN66144.1
Asparagine synthase (glutamine-hydrolysing).
 
    0.809
SHN66152.1
Hypothetical protein.
 
     0.688
SHN66103.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.659
SHN67329.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
  0.656
SHN70787.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase).
 
 
  0.608
SHN66162.1
Serine O-acetyltransferase.
       0.575
SHN66171.1
D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily; Belongs to the membrane-bound acyltransferase family.
       0.573
SHN66111.1
Hypothetical protein.
       0.548
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
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