STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN68243.1Hypothetical protein. (303 aa)    
Predicted Functional Partners:
SHN68251.1
O-succinylbenzoic acid--CoA ligase.
       0.834
SHN75915.1
Hypothetical protein.
  
     0.763
SHN74304.1
Protein of unknown function.
  
     0.756
SHN51001.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.726
SHN72861.1
Hypothetical protein.
  
     0.702
SHN50571.1
Hypothetical protein.
  
     0.697
SHN51043.1
Aspartyl protease.
  
     0.694
SHN66965.1
CarboxypepD_reg-like domain-containing protein.
  
     0.689
SHN63856.1
Hypothetical protein.
  
     0.660
SHN67058.1
Putative MetA-pathway of phenol degradation.
  
     0.658
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.