STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN66872.1Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (368 aa)    
Predicted Functional Partners:
SHN66678.1
Glutamate synthase (NADH) large subunit.
  
 0.999
SHN71554.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.962
SHN71094.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.923
SHN58700.1
Branched-chain amino acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.899
SHN61710.1
Branched-chain amino acid aminotransferase.
  
 
 0.888
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
   
 
 0.884
SHN71534.1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
   
 
 0.840
SHN66987.1
Glutamate synthase conserved region-containing protein.
   
 0.787
SHN66995.1
Glutamate synthase conserved region-containing protein.
   
 0.787
SHN67003.1
Hypothetical protein.
   
 0.787
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.