STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN69225.1Acyl-CoA dehydrogenase. (389 aa)    
Predicted Functional Partners:
SHN58567.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.997
SHN49722.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.986
SHN49710.1
Electron transfer flavoprotein beta subunit.
 
 0.976
SHN52410.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.947
SHN58579.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.946
SHN58050.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.946
SHN58533.1
Long-chain acyl-CoA synthetase.
  
 0.918
SHN68268.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.914
SHN54919.1
methylglutaconyl-CoA hydratase.
 
 0.879
SHN50778.1
glutaryl-CoA dehydrogenase.
  
  
 
0.874
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.