Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN49542.1 | SHN70715.1 | SAMN05444395_10159 | SAMN05444395_1069 | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | Hypothetical protein. | 0.422 |
SHN70710.1 | SHN70715.1 | SAMN05444395_1067 | SAMN05444395_1069 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.513 |
SHN70710.1 | SHN70722.1 | SAMN05444395_1067 | SAMN05444395_10610 | Predicted arabinose efflux permease, MFS family. | TatD DNase family protein. | 0.533 |
SHN70715.1 | SHN49542.1 | SAMN05444395_1069 | SAMN05444395_10159 | Hypothetical protein. | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 0.422 |
SHN70715.1 | SHN70710.1 | SAMN05444395_1069 | SAMN05444395_1067 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.513 |
SHN70715.1 | SHN70722.1 | SAMN05444395_1069 | SAMN05444395_10610 | Hypothetical protein. | TatD DNase family protein. | 0.780 |
SHN70715.1 | SHN70726.1 | SAMN05444395_1069 | SAMN05444395_10611 | Hypothetical protein. | tRNA A37 threonylcarbamoyladenosine dehydratase. | 0.520 |
SHN70715.1 | SHN70736.1 | SAMN05444395_1069 | SAMN05444395_10613 | Hypothetical protein. | Protein of unknown function. | 0.442 |
SHN70722.1 | SHN70710.1 | SAMN05444395_10610 | SAMN05444395_1067 | TatD DNase family protein. | Predicted arabinose efflux permease, MFS family. | 0.533 |
SHN70722.1 | SHN70715.1 | SAMN05444395_10610 | SAMN05444395_1069 | TatD DNase family protein. | Hypothetical protein. | 0.780 |
SHN70722.1 | SHN70726.1 | SAMN05444395_10610 | SAMN05444395_10611 | TatD DNase family protein. | tRNA A37 threonylcarbamoyladenosine dehydratase. | 0.763 |
SHN70726.1 | SHN70715.1 | SAMN05444395_10611 | SAMN05444395_1069 | tRNA A37 threonylcarbamoyladenosine dehydratase. | Hypothetical protein. | 0.520 |
SHN70726.1 | SHN70722.1 | SAMN05444395_10611 | SAMN05444395_10610 | tRNA A37 threonylcarbamoyladenosine dehydratase. | TatD DNase family protein. | 0.763 |
SHN70736.1 | SHN70715.1 | SAMN05444395_10613 | SAMN05444395_1069 | Protein of unknown function. | Hypothetical protein. | 0.442 |