STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN74156.1Acetyltransferase (GNAT) domain-containing protein. (316 aa)    
Predicted Functional Partners:
SHN74136.1
Polysaccharide transporter, PST family.
 
     0.911
SHN74151.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.834
SHN74143.1
Maltose O-acetyltransferase.
       0.780
SHN74130.1
Hypothetical protein.
  
     0.751
SHN74117.1
WxcM-like, C-terminal.
 
     0.736
SHN74164.1
Uncharacterized membrane protein YeiH.
       0.671
SHN49600.1
Hypothetical protein.
  
     0.613
SHN78801.1
Hypothetical protein.
  
     0.601
SHN60466.1
Cyanophycin synthetase; Belongs to the MurCDEF family.
    
 0.600
SHN78234.1
Hypothetical protein.
  
     0.592
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
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