STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN74217.1Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). (212 aa)    
Predicted Functional Partners:
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 
 0.701
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
 
      0.683
SHN49434.1
Thioredoxin reductase (NADPH).
  
 
 0.681
SHN78193.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.681
SHN80150.1
Thioredoxin reductase (NADPH).
  
 
 0.681
SHN50769.1
Thiol-disulfide isomerase or thioredoxin.
   
  0.657
SHN55197.1
Thioredoxin.
   
  0.657
SHN60193.1
AhpC/TSA family protein.
   
  0.657
SHN72960.1
Thiol-disulfide isomerase or thioredoxin.
   
  0.657
SHN76449.1
Thiol-disulfide isomerase or thioredoxin.
   
  0.657
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.