Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN52452.1 | SHN54464.1 | SAMN05444395_101391 | SAMN05444395_101664 | Acyl-[acyl-carrier-protein] desaturase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.890 |
SHN52452.1 | SHN71466.1 | SAMN05444395_101391 | SAMN05444395_106171 | Acyl-[acyl-carrier-protein] desaturase. | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.838 |
SHN52452.1 | SHN73666.1 | SAMN05444395_101391 | SAMN05444395_1086 | Acyl-[acyl-carrier-protein] desaturase. | Enoyl-[acyl-carrier protein] reductase II. | 0.890 |
SHN54464.1 | SHN52452.1 | SAMN05444395_101664 | SAMN05444395_101391 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Acyl-[acyl-carrier-protein] desaturase. | 0.890 |
SHN54464.1 | SHN71462.1 | SAMN05444395_101664 | SAMN05444395_106170 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Acyl carrier protein. | 0.869 |
SHN54464.1 | SHN71466.1 | SAMN05444395_101664 | SAMN05444395_106171 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.870 |
SHN54464.1 | SHN71471.1 | SAMN05444395_101664 | SAMN05444395_106172 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.880 |
SHN54464.1 | SHN73666.1 | SAMN05444395_101664 | SAMN05444395_1086 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Enoyl-[acyl-carrier protein] reductase II. | 0.937 |
SHN54464.1 | acpP | SAMN05444395_101664 | SAMN05444395_101665 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.948 |
SHN54464.1 | lipB | SAMN05444395_101664 | SAMN05444395_103317 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.890 |
SHN54464.1 | lpxC | SAMN05444395_101664 | SAMN05444395_10698 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.948 |
SHN71462.1 | SHN54464.1 | SAMN05444395_106170 | SAMN05444395_101664 | Acyl carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.869 |
SHN71462.1 | SHN71466.1 | SAMN05444395_106170 | SAMN05444395_106171 | Acyl carrier protein. | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.985 |
SHN71462.1 | SHN71471.1 | SAMN05444395_106170 | SAMN05444395_106172 | Acyl carrier protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.984 |
SHN71462.1 | SHN73666.1 | SAMN05444395_106170 | SAMN05444395_1086 | Acyl carrier protein. | Enoyl-[acyl-carrier protein] reductase II. | 0.770 |
SHN71462.1 | lipB | SAMN05444395_106170 | SAMN05444395_103317 | Acyl carrier protein. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.838 |
SHN71462.1 | lpxC | SAMN05444395_106170 | SAMN05444395_10698 | Acyl carrier protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.920 |
SHN71466.1 | SHN52452.1 | SAMN05444395_106171 | SAMN05444395_101391 | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acyl-[acyl-carrier-protein] desaturase. | 0.838 |
SHN71466.1 | SHN54464.1 | SAMN05444395_106171 | SAMN05444395_101664 | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.870 |
SHN71466.1 | SHN71462.1 | SAMN05444395_106171 | SAMN05444395_106170 | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acyl carrier protein. | 0.985 |
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