STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN76332.1ABC-2 type transport system permease protein. (373 aa)    
Predicted Functional Partners:
SHN76318.1
ABC-2 type transport system ATP-binding protein.
 
 0.994
SHN76312.1
ABC-type multidrug transport system, ATPase component.
 
 0.993
SHN49387.1
Protein involved in gliding motility GldA.
 
 
 0.917
SHN59594.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.860
SHN76325.1
ABC-2 type transport system permease protein.
 
  
 
0.857
SHN76298.1
HlyD family secretion protein.
 
    0.855
SHN76293.1
Outer membrane protein TolC.
 
     0.847
SHN76287.1
Transcriptional regulator, TetR family.
 
     0.803
SHN74430.1
Lipopolysaccharide export system ATP-binding protein.
   
  0.757
SHN79080.1
ABC-2 type transport system ATP-binding protein.
 
      0.699
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.