Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN54524.1 | SHN80364.1 | SAMN05444395_101672 | SAMN05444395_1253 | comF family protein. | Site-specific recombinase XerD. | 0.422 |
SHN73110.1 | SHN80364.1 | SAMN05444395_107169 | SAMN05444395_1253 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Site-specific recombinase XerD. | 0.488 |
SHN78990.1 | SHN80364.1 | SAMN05444395_1153 | SAMN05444395_1253 | Putative transposase. | Site-specific recombinase XerD. | 0.757 |
SHN79981.1 | SHN80364.1 | SAMN05444395_1196 | SAMN05444395_1253 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Site-specific recombinase XerD. | 0.482 |
SHN80364.1 | SHN54524.1 | SAMN05444395_1253 | SAMN05444395_101672 | Site-specific recombinase XerD. | comF family protein. | 0.422 |
SHN80364.1 | SHN73110.1 | SAMN05444395_1253 | SAMN05444395_107169 | Site-specific recombinase XerD. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.488 |
SHN80364.1 | SHN78990.1 | SAMN05444395_1253 | SAMN05444395_1153 | Site-specific recombinase XerD. | Putative transposase. | 0.757 |
SHN80364.1 | SHN79981.1 | SAMN05444395_1253 | SAMN05444395_1196 | Site-specific recombinase XerD. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.482 |
SHN80364.1 | SHN80369.1 | SAMN05444395_1253 | SAMN05444395_1254 | Site-specific recombinase XerD. | Transposase zinc-binding domain-containing protein. | 0.868 |
SHN80369.1 | SHN80364.1 | SAMN05444395_1254 | SAMN05444395_1253 | Transposase zinc-binding domain-containing protein. | Site-specific recombinase XerD. | 0.868 |