STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN80409.1HYR domain-containing protein. (814 aa)    
Predicted Functional Partners:
SHN79981.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.563
SHN49911.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
  0.506
SHN52471.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
  0.506
SHN57612.1
Peptidase family S41.
   
  0.506
SHN60959.1
C-terminal processing protease CtpA/Prc, contains a PDZ domain.
   
  0.506
SHN68363.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
  0.506
SHN73156.1
Hypothetical protein.
   
  0.506
SHN78198.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
  0.506
SHN70028.1
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region.
    
  0.482
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.466
Your Current Organism:
Flavobacterium fryxellicola
NCBI taxonomy Id: 249352
Other names: CIP 108325, DSM 16209, F. fryxellicola, Flavobacterium fryxellicola Van Trappen et al. 2005 emend. Hahnke et al. 2016, LMG 22022, LMG:22022
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.