STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLV20350.1Response regulator. (86 aa)    
Predicted Functional Partners:
OLV17752.1
Signal transduction histidine kinase CheA.
  
 0.973
OLV18636.1
Chemotaxis protein methyltransferase CheR.
   
 0.892
OLV20069.1
Two-component sensor histidine kinase protein.
  
 0.886
OLV16707.1
Phytochrome, two-component sensor histidine kinase.
  
 0.886
OLV18637.1
Sensory box histidine kinase.
  
 0.879
OLV17750.1
Methyl-accepting chemotaxis protein.
   
 0.797
OLV18043.1
Two-component response regulator.
 
  
 0.778
OLV17751.1
Methyl-accepting chemotaxis protein.
   
 0.760
OLV17844.1
HD-hydrolase domain.
  
 0.758
OLV17571.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 0.758
Your Current Organism:
Deinococcus marmoris
NCBI taxonomy Id: 249408
Other names: D. marmoris, DSM 12784, Deinococcus marmoris Hirsch et al. 2006, Deinococcus sp. AA63, Deinococcus sp. AA69, Deinococcus sp. KOPRI26562, NRRL B-41042, strain AA-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.