STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLV19580.1Glycerol-3-phosphate ABC transporter, permease protein UgpE. (296 aa)    
Predicted Functional Partners:
OLV19579.1
Glycerol-3-phosphate ABC transporter, permease protein UgpA.
 
  0.998
OLV19577.1
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein.
 
  0.995
OLV16663.1
Sugar-binding protein.
  
  0.957
OLV19578.1
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein.
 
  0.954
OLV16210.1
N-Acetyl-D-glucosamine ABC transport system, permease protein 1.
 
  0.933
OLV15585.1
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF.
 
  0.933
OLV18910.1
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein.
  
  0.920
OLV16941.1
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF.
  
  0.876
OLV16430.1
Binding-protein-dependent transport systems inner membrane component.
  
  0.876
OLV18497.1
Binding-protein-dependent transport systems inner membrane component.
  
  0.875
Your Current Organism:
Deinococcus marmoris
NCBI taxonomy Id: 249408
Other names: D. marmoris, DSM 12784, Deinococcus marmoris Hirsch et al. 2006, Deinococcus sp. AA63, Deinococcus sp. AA69, Deinococcus sp. KOPRI26562, NRRL B-41042, strain AA-63
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