Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OLV17599.1Transcriptional regulator, GntR family. (132 aa)    
Predicted Functional Partners:
OLV19259.1
Nicotinamide-nucleotide adenylyltransferase, NadR family / Ribosylnicotinamide kinase.
   
    0.848
OLV17598.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
       0.671
OLV19808.1
UPF0301 protein YqgE; Belongs to the UPF0301 (AlgH) family.
   
    0.594
OLV17681.1
Transcriptional regulator, GntR family.
  
     0.537
OLV16587.1
Type II restriction enzyme NspV (Endonuclease NspV) (R.NspV).
   
    0.462
OLV16611.1
Nicotinamide-nucleotide adenylyltransferase.
   
    0.461
cobB
NAD-dependent protein deacetylase of SIR2 family; Belongs to the sirtuin family. Class III subfamily.
  
    0.439
Your Current Organism:
Deinococcus marmoris
NCBI taxonomy Id: 249408
Other names: D. marmoris, DSM 12784, Deinococcus marmoris Hirsch et al. 2006, Deinococcus sp. AA63, Deinococcus sp. AA69, Deinococcus sp. KOPRI26562, NRRL B-41042, strain AA-63
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