Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
OLV16944.1Transcriptional regulator, LacI family. (87 aa)    
Predicted Functional Partners:
OLV16943.1
Membrane protein.
   
   0.800
OLV20273.1
Glutamate synthase [NADPH] large chain.
    
 
 0.774
OLV16940.1
N-Acetyl-D-glucosamine ABC transport system, permease protein 2.
       0.773
OLV16941.1
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF.
       0.773
OLV16942.1
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein.
       0.773
guaA
GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP.
    
   0.594
OLV16938.1
Xylose isomerase domain protein TIM barrel.
  
    0.505
OLV16939.1
Hypothetical protein.
       0.499
pheT
Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.470
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
    
   0.470
Your Current Organism:
Deinococcus marmoris
NCBI taxonomy Id: 249408
Other names: D. marmoris, DSM 12784, Deinococcus marmoris Hirsch et al. 2006, Deinococcus sp. AA63, Deinococcus sp. AA69, Deinococcus sp. KOPRI26562, NRRL B-41042, strain AA-63
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