STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLV16834.1Hypothetical protein. (470 aa)    
Predicted Functional Partners:
OLV17811.1
Uroporphyrinogen-III methyltransferase.
  
 
 0.998
OLV17120.1
Uroporphyrinogen-III methyltransferase / Uroporphyrinogen-III synthase.
  
 
 0.926
OLV16833.1
Hypothetical protein.
       0.704
OLV19177.1
Cobalt-precorrin-6y C5-methyltransferase.
 
  
 0.615
cbiA
Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
    
 0.610
OLV18581.1
Ferredoxin--sulfite reductase, actinobacterial type; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.610
OLV15433.1
Acetyltransferase.
  
   
 0.607
OLV19888.1
Isomerase yddE, PhzC-PhzF family.
  
     0.592
OLV17196.1
Heme biosynthesis protein related to NirD and NirG.
  
 
  0.582
OLV18579.1
Phosphoadenylyl-sulfate reductase, thioredoxin / Adenylyl-sulfate reductase, thioredoxin; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.569
Your Current Organism:
Deinococcus marmoris
NCBI taxonomy Id: 249408
Other names: D. marmoris, DSM 12784, Deinococcus marmoris Hirsch et al. 2006, Deinococcus sp. AA63, Deinococcus sp. AA69, Deinococcus sp. KOPRI26562, NRRL B-41042, strain AA-63
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