STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLV16361.1Hypothetical protein. (249 aa)    
Predicted Functional Partners:
OLV17499.1
TPR repeat protein.
   
 0.982
OLV17535.1
FKBP-type peptidyl-prolyl cis-trans isomerase.
    
 0.979
OLV19428.1
Ankyrin repeat domain protein.
    
 0.978
OLV18773.1
Hypothetical protein.
    
 0.978
OLV17800.1
Ankyrin repeat.
    
 0.978
OLV16182.1
Ankyrin repeat protein.
    
 0.978
OLV16811.1
High-affnity carbon uptake protein Hat/HatR.
   
 0.975
OLV16143.1
Hypothetical protein.
   
 0.975
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
   0.917
OLV18945.1
Metallo-beta-lactamase family protein.
   
  0.917
Your Current Organism:
Deinococcus marmoris
NCBI taxonomy Id: 249408
Other names: D. marmoris, DSM 12784, Deinococcus marmoris Hirsch et al. 2006, Deinococcus sp. AA63, Deinococcus sp. AA69, Deinococcus sp. KOPRI26562, NRRL B-41042, strain AA-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.