STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLV16288.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
OLV17009.1
Membrane protein (DUF990 family).
  
     0.620
OLV17100.1
Superoxide dismutase [Cu-Zn] precursor.
  
     0.616
OLV17010.1
ABC transporter permease protein.
  
     0.613
OLV20096.1
Phosphotransferase.
  
 
   0.611
OLV15945.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.570
OLV16305.1
Hypothetical protein.
  
     0.565
OLV18732.1
Regulatory protein, MerR.
  
    0.554
OLV20273.1
Glutamate synthase [NADPH] large chain.
   
 
 0.545
OLV17804.1
Tricarboxylate transport protein TctB.
  
     0.534
OLV16699.1
Sugar binding protein, ABC transport system precursor.
  
     0.470
Your Current Organism:
Deinococcus marmoris
NCBI taxonomy Id: 249408
Other names: D. marmoris, DSM 12784, Deinococcus marmoris Hirsch et al. 2006, Deinococcus sp. AA63, Deinococcus sp. AA69, Deinococcus sp. KOPRI26562, NRRL B-41042, strain AA-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.