STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0019ORF_ID:gll0019; unknown protein. (460 aa)    
Predicted Functional Partners:
gll0020
ORF_ID:gll0020; unknown protein.
 
 0.940
gll0021
HlyB/MsbA family ABC transporter; ORF_ID:gll0021.
 
  
 0.910
gll2291
ORF_ID:gll2291; unknown protein.
  
     0.572
gll0018
ORF_ID:gll0018; hypothetical protein.
       0.528
gll0363
ORF_ID:gll0363; hypothetical protein.
  
     0.493
gll0346
ORF_ID:gll0346; hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.452
gll0487
ORF_ID:gll0487; permease protein DevB homolog.
  
 
 0.452
gll0495
ORF_ID:gll0495; hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.452
gll0775
ORF_ID:gll0775; hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.452
glr1272
ORF_ID:glr1272; unknown protein.
  
 
 0.452
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.