STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0093Aminopeptidase P; ORF_ID:glr0093; Belongs to the peptidase M24B family. (462 aa)    
Predicted Functional Partners:
glr0092
ORF_ID:glr0092; unknown protein.
       0.752
gll1884
Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
 0.632
gll4350
ORF_ID:gll4350; hypothetical protein.
  
     0.627
glr0257
ORF_ID:glr0257; unknown protein.
  
     0.618
glr0609
ORF_ID:glr0609; hypothetical protein.
  
     0.610
gll0091
ORF_ID:gll0091; hypothetical protein.
       0.537
glr1715
ORF_ID:glr1715; hypothetical protein.
  
     0.464
glr1603
IMP dehydrogenase; ORF_ID:glr1603.
  
 
 0.457
gsr0732
ORF_ID:gsr0732; hypothetical protein.
  
     0.436
glr4158
ORF_ID:glr4158; hypothetical protein.
 
     0.435
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.