STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0428ORF_ID:gll0428; hypothetical protein. (176 aa)    
Predicted Functional Partners:
gll1412
ORF_ID:gll1412; hypothetical protein.
 
 
 
 0.978
gll1413
ORF_ID:gll1413; hypothetical protein.
 
   0.974
glr4100
ORF_ID:glr4100; similar to bacteriophage major tail sheath protein.
 
 
 0.974
gll0426
ORF_ID:gll0426; hypothetical protein.
  
   0.962
glr4099
ORF_ID:glr4099; hypothetical protein.
 
 
   0.925
gll0425
ORF_ID:gll0425; hypothetical protein.
 
  
 0.916
gll0431
ORF_ID:gll0431; probable serine/threonine kinase.
 
     0.884
gll0427
ORF_ID:gll0427; unknown protein.
 
     0.858
glr4104
ORF_ID:glr4104; hypothetical protein.
 
    0.789
gll1411
ORF_ID:gll1411; hypothetical protein.
 
     0.788
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.