Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| glr0223 | glr0513 | gene:10757695 | gene:10757985 | ORF_ID:glr0223; unknown protein. | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.971 |
| glr0223 | glr1449 | gene:10757695 | gene:10758933 | ORF_ID:glr0223; unknown protein. | ORF_ID:glr1449; hypothetical protein. | 0.455 |
| glr0223 | polA | gene:10757695 | gene:10758111 | ORF_ID:glr0223; unknown protein. | DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.906 |
| glr0223 | recA | gene:10757695 | gene:10760928 | ORF_ID:glr0223; unknown protein. | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.700 |
| glr0223 | recQ | gene:10757695 | gene:10760129 | ORF_ID:glr0223; unknown protein. | ATP-dependent DNA helicase; ORF_ID:gll2629. | 0.745 |
| glr0223 | recQ-2 | gene:10757695 | gene:10761497 | ORF_ID:glr0223; unknown protein. | ATP-dependent DNA helicase; ORF_ID:glr3980. | 0.745 |
| glr0513 | glr0223 | gene:10757985 | gene:10757695 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | ORF_ID:glr0223; unknown protein. | 0.971 |
| glr0513 | glr1449 | gene:10757985 | gene:10758933 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | ORF_ID:glr1449; hypothetical protein. | 0.772 |
| glr0513 | glr2862 | gene:10757985 | gene:10760366 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | ORF_ID:glr2862; hypothetical protein. | 0.998 |
| glr0513 | glr3013 | gene:10757985 | gene:10760517 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | ORF_ID:glr3013; hypothetical protein. | 0.781 |
| glr0513 | glr4039 | gene:10757985 | gene:10761557 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | ORF_ID:glr4039; hypothetical protein. | 0.786 |
| glr0513 | glr4405 | gene:10757985 | gene:10761924 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | ORF_ID:glr4405; hypothetical protein. | 0.788 |
| glr0513 | polA | gene:10757985 | gene:10758111 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.988 |
| glr0513 | recA | gene:10757985 | gene:10760928 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.754 |
| glr0513 | recQ | gene:10757985 | gene:10760129 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | ATP-dependent DNA helicase; ORF_ID:gll2629. | 0.805 |
| glr0513 | recQ-2 | gene:10757985 | gene:10761497 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | ATP-dependent DNA helicase; ORF_ID:glr3980. | 0.805 |
| glr1449 | glr0223 | gene:10758933 | gene:10757695 | ORF_ID:glr1449; hypothetical protein. | ORF_ID:glr0223; unknown protein. | 0.455 |
| glr1449 | glr0513 | gene:10758933 | gene:10757985 | ORF_ID:glr1449; hypothetical protein. | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.772 |
| glr1449 | glr2862 | gene:10758933 | gene:10760366 | ORF_ID:glr1449; hypothetical protein. | ORF_ID:glr2862; hypothetical protein. | 0.432 |
| glr1449 | glr4039 | gene:10758933 | gene:10761557 | ORF_ID:glr1449; hypothetical protein. | ORF_ID:glr4039; hypothetical protein. | 0.469 |
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