STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0642ORF_ID:gll0642; hypothetical protein. (486 aa)    
Predicted Functional Partners:
gll0643
ORF_ID:gll0643; unknown protein.
       0.773
gll0644
ORF_ID:gll0644; unknown protein.
       0.678
gll0645
ORF_ID:gll0645; unknown protein.
 
     0.676
glr1060
ORF_ID:glr1060; hypothetical protein.
 
     0.672
gll0641
ORF_ID:gll0641; hypothetical protein.
 
    
0.649
gll3629
ORF_ID:gll3629; hypothetical protein.
 
     0.577
gll1277
ORF_ID:gll1277; unknown protein.
  
     0.511
gll0640
ORF_ID:gll0640; similar to glucosamine-6-sulfatase.
       0.505
gll0047
ORF_ID:gll0047; unknown protein.
  
     0.492
gll3628
ORF_ID:gll3628; hypothetical protein.
 
     0.472
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.