Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gll0681 | gll0683 | gene:10758157 | gene:10758159 | Prolyl endopeptidase; ORF_ID:gll0681. | ORF_ID:gll0683; hypothetical protein. | 0.452 |
gll0681 | sodB | gene:10758157 | gene:10758158 | Prolyl endopeptidase; ORF_ID:gll0681. | Superoxide dismutase; ORF_ID:gll0682. | 0.572 |
gll0683 | gll0681 | gene:10758159 | gene:10758157 | ORF_ID:gll0683; hypothetical protein. | Prolyl endopeptidase; ORF_ID:gll0681. | 0.452 |
gll0683 | glr0684 | gene:10758159 | gene:10758160 | ORF_ID:gll0683; hypothetical protein. | ORF_ID:glr0684; hypothetical protein. | 0.571 |
gll0683 | glr1311 | gene:10758159 | gene:10758792 | ORF_ID:gll0683; hypothetical protein. | ORF_ID:glr1311; hypothetical protein. | 0.435 |
gll0683 | sodB | gene:10758159 | gene:10758158 | ORF_ID:gll0683; hypothetical protein. | Superoxide dismutase; ORF_ID:gll0682. | 0.598 |
glr0684 | gll0683 | gene:10758160 | gene:10758159 | ORF_ID:glr0684; hypothetical protein. | ORF_ID:gll0683; hypothetical protein. | 0.571 |
glr0684 | sodB | gene:10758160 | gene:10758158 | ORF_ID:glr0684; hypothetical protein. | Superoxide dismutase; ORF_ID:gll0682. | 0.451 |
glr1311 | gll0683 | gene:10758792 | gene:10758159 | ORF_ID:glr1311; hypothetical protein. | ORF_ID:gll0683; hypothetical protein. | 0.435 |
sodB | gll0681 | gene:10758158 | gene:10758157 | Superoxide dismutase; ORF_ID:gll0682. | Prolyl endopeptidase; ORF_ID:gll0681. | 0.572 |
sodB | gll0683 | gene:10758158 | gene:10758159 | Superoxide dismutase; ORF_ID:gll0682. | ORF_ID:gll0683; hypothetical protein. | 0.598 |
sodB | glr0684 | gene:10758158 | gene:10758160 | Superoxide dismutase; ORF_ID:gll0682. | ORF_ID:glr0684; hypothetical protein. | 0.451 |