STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0978ORF_ID:glr0978; hypothetical protein; Belongs to the UPF0332 family. (126 aa)    
Predicted Functional Partners:
glr0977
ORF_ID:glr0977; hypothetical protein.
 
     0.949
glr4403
ORF_ID:glr4403; hypothetical protein.
  
     0.531
glr2347
ORF_ID:glr2347; hypothetical protein.
  
     0.508
gsl3523
ORF_ID:gsl3523; hypothetical protein.
  
     0.483
glr0309
ORF_ID:glr0309; hypothetical protein.
  
     0.469
gll4091
ORF_ID:gll4091; hypothetical protein.
  
     0.469
gll2293
ORF_ID:gll2293; hypothetical protein.
 
     0.463
gsr0615
ORF_ID:gsr0615; hypothetical protein.
  
     0.441
gsl0355
ORF_ID:gsl0355; hypothetical protein.
  
     0.428
glr2609
ORF_ID:glr2609; hypothetical protein.
  
     0.410
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.